Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.14■□□□□ 0.01
Ctla2aP12399 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla2aP12399 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Gm13401-201ENSMUST00000117074 291 ntBASIC15.13■□□□□ 0.01
Ctla2aP12399 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla2aP12399 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ctla2aP12399 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ctla2aP12399 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Gm38285-201ENSMUST00000192928 922 ntBASIC15.12■□□□□ 0.01
Ctla2aP12399 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.12■□□□□ 0.01
Ctla2aP12399 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.12■□□□□ 0.01
Ctla2aP12399 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ctla2aP12399 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ctla2aP12399 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Ctla2aP12399 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ctla2aP12399 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ctla2aP12399 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctla2aP12399 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.11■□□□□ 0.01
Ctla2aP12399 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ctla2aP12399 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.11■□□□□ 0.01
Ctla2aP12399 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.11■□□□□ 0.01
Ctla2aP12399 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.11■□□□□ 0.01
Ctla2aP12399 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.11■□□□□ 0.01
Ctla2aP12399 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctla2aP12399 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctla2aP12399 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctla2aP12399 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctla2aP12399 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctla2aP12399 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms