Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Gm25745-201ENSMUST00000174945 133 ntBASIC21.66■■□□□ 1.06
Hoxc9P09633 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Gm10060-201ENSMUST00000212002 111 ntBASIC21.66■■□□□ 1.06
Hoxc9P09633 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.66■■□□□ 1.06
Hoxc9P09633 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Hoxc9P09633 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxc9P09633 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Hoxc9P09633 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.65■■□□□ 1.06
Hoxc9P09633 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Hoxc9P09633 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Hoxc9P09633 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Hoxc9P09633 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hoxc9P09633 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hoxc9P09633 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Hoxc9P09633 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.64■■□□□ 1.05
Hoxc9P09633 Gm12350-201ENSMUST00000121208 462 ntBASIC21.64■■□□□ 1.05
Hoxc9P09633 Gm1401-201ENSMUST00000122048 772 ntBASIC21.64■■□□□ 1.05
Hoxc9P09633 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.64■■□□□ 1.05
Hoxc9P09633 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.64■■□□□ 1.05
Hoxc9P09633 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.64■■□□□ 1.05
Hoxc9P09633 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.64■■□□□ 1.05
Hoxc9P09633 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.64■■□□□ 1.05
Hoxc9P09633 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.64■■□□□ 1.05
Hoxc9P09633 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.64■■□□□ 1.05
Hoxc9P09633 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Hoxc9P09633 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxc9P09633 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.63■■□□□ 1.05
Hoxc9P09633 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.63■■□□□ 1.05
Hoxc9P09633 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Hoxc9P09633 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.63■■□□□ 1.05
Hoxc9P09633 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.63■■□□□ 1.05
Hoxc9P09633 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.63■■□□□ 1.05
Hoxc9P09633 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxc9P09633 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hoxc9P09633 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hoxc9P09633 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Hoxc9P09633 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.62■■□□□ 1.05
Hoxc9P09633 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.62■■□□□ 1.05
Hoxc9P09633 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hoxc9P09633 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Hoxc9P09633 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hoxc9P09633 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hoxc9P09633 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.62■■□□□ 1.05
Hoxc9P09633 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Hoxc9P09633 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Hoxc9P09633 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.61■■□□□ 1.05
Hoxc9P09633 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.61■■□□□ 1.05
Hoxc9P09633 Gm7506-201ENSMUST00000207758 815 ntBASIC21.61■■□□□ 1.05
Hoxc9P09633 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.61■■□□□ 1.05
Hoxc9P09633 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Hoxc9P09633 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.61■■□□□ 1.05
Hoxc9P09633 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxc9P09633 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms