Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TnfP06804 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TnfP06804 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TnfP06804 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TnfP06804 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TnfP06804 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.75■□□□□ 0.43
TnfP06804 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.75■□□□□ 0.43
TnfP06804 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TnfP06804 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.74■□□□□ 0.43
TnfP06804 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
TnfP06804 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.74■□□□□ 0.43
TnfP06804 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.74■□□□□ 0.43
TnfP06804 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.74■□□□□ 0.43
TnfP06804 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.74■□□□□ 0.43
TnfP06804 Gm17971-201ENSMUST00000190239 806 ntBASIC17.74■□□□□ 0.43
TnfP06804 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.74■□□□□ 0.43
TnfP06804 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.74■□□□□ 0.43
TnfP06804 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.74■□□□□ 0.43
TnfP06804 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TnfP06804 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TnfP06804 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.73■□□□□ 0.43
TnfP06804 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TnfP06804 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.73■□□□□ 0.43
TnfP06804 Gm27741-201ENSMUST00000185060 237 ntBASIC17.73■□□□□ 0.43
TnfP06804 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TnfP06804 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.73■□□□□ 0.43
TnfP06804 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TnfP06804 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.72■□□□□ 0.43
TnfP06804 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.72■□□□□ 0.43
TnfP06804 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.72■□□□□ 0.43
TnfP06804 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TnfP06804 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.72■□□□□ 0.43
TnfP06804 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TnfP06804 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TnfP06804 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.71■□□□□ 0.43
TnfP06804 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TnfP06804 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.71■□□□□ 0.43
TnfP06804 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.71■□□□□ 0.43
TnfP06804 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TnfP06804 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
TnfP06804 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TnfP06804 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.71■□□□□ 0.42
TnfP06804 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TnfP06804 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TnfP06804 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TnfP06804 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.7■□□□□ 0.42
TnfP06804 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TnfP06804 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms