Protein–RNA interactions for Protein: P06332

Cd4, T-cell surface glycoprotein CD4, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd4P06332 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.66■□□□□ 0.26
Cd4P06332 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cd4P06332 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cd4P06332 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cd4P06332 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd4P06332 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cd4P06332 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cd4P06332 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.65■□□□□ 0.26
Cd4P06332 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.65■□□□□ 0.26
Cd4P06332 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Cd4P06332 Gm11539-201ENSMUST00000119837 557 ntBASIC16.65■□□□□ 0.26
Cd4P06332 Gm13436-201ENSMUST00000120418 567 ntBASIC16.65■□□□□ 0.26
Cd4P06332 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.65■□□□□ 0.26
Cd4P06332 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.65■□□□□ 0.26
Cd4P06332 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cd4P06332 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cd4P06332 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd4P06332 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cd4P06332 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Cd4P06332 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cd4P06332 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.64■□□□□ 0.25
Cd4P06332 Gm2274-201ENSMUST00000184539 609 ntBASIC16.64■□□□□ 0.25
Cd4P06332 Gm7370-201ENSMUST00000219471 767 ntBASIC16.64■□□□□ 0.25
Cd4P06332 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cd4P06332 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cd4P06332 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cd4P06332 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd4P06332 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cd4P06332 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cd4P06332 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cd4P06332 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.63■□□□□ 0.25
Cd4P06332 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cd4P06332 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cd4P06332 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Cd4P06332 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cd4P06332 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd4P06332 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cd4P06332 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cd4P06332 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.62■□□□□ 0.25
Cd4P06332 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd4P06332 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms