Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tuba1bP05213 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tuba1bP05213 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tuba1bP05213 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Tuba1bP05213 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.55■□□□□ 0.08
Tuba1bP05213 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Tuba1bP05213 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.54■□□□□ 0.08
Tuba1bP05213 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.54■□□□□ 0.08
Tuba1bP05213 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tuba1bP05213 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.53■□□□□ 0.08
Tuba1bP05213 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.53■□□□□ 0.08
Tuba1bP05213 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tuba1bP05213 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.53■□□□□ 0.08
Tuba1bP05213 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tuba1bP05213 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tuba1bP05213 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.52■□□□□ 0.08
Tuba1bP05213 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.52■□□□□ 0.08
Tuba1bP05213 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.52■□□□□ 0.08
Tuba1bP05213 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.52■□□□□ 0.08
Tuba1bP05213 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tuba1bP05213 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tuba1bP05213 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tuba1bP05213 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.51■□□□□ 0.07
Tuba1bP05213 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tuba1bP05213 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.51■□□□□ 0.07
Tuba1bP05213 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.51■□□□□ 0.07
Tuba1bP05213 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Gm10698-201ENSMUST00000182663 604 ntBASIC15.51■□□□□ 0.07
Tuba1bP05213 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.51■□□□□ 0.07
Tuba1bP05213 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.51■□□□□ 0.07
Tuba1bP05213 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tuba1bP05213 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tuba1bP05213 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tuba1bP05213 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms