Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.51■□□□□ 0.87
Col4a1P02463 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.51■□□□□ 0.87
Col4a1P02463 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a1P02463 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a1P02463 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col4a1P02463 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a1P02463 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Col4a1P02463 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.5■□□□□ 0.87
Col4a1P02463 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a1P02463 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a1P02463 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a1P02463 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a1P02463 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Col4a1P02463 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.49■□□□□ 0.87
Col4a1P02463 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Col4a1P02463 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Col4a1P02463 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.49■□□□□ 0.87
Col4a1P02463 Gm5364-201ENSMUST00000216789 889 ntBASIC20.49■□□□□ 0.87
Col4a1P02463 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.49■□□□□ 0.87
Col4a1P02463 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a1P02463 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.49■□□□□ 0.87
Col4a1P02463 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Gm25925-201ENSMUST00000158314 306 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Gm7230-201ENSMUST00000173026 815 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Gm8097-201ENSMUST00000117903 829 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Gm4459-201ENSMUST00000118750 468 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Gm15173-201ENSMUST00000122049 433 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Gm11594-201ENSMUST00000122313 162 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a1P02463 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.48■□□□□ 0.87
Col4a1P02463 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col4a1P02463 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.47■□□□□ 0.87
Col4a1P02463 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.47■□□□□ 0.87
Col4a1P02463 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.47■□□□□ 0.87
Col4a1P02463 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.47■□□□□ 0.87
Col4a1P02463 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a1P02463 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Col4a1P02463 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Col4a1P02463 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.46■□□□□ 0.87
Col4a1P02463 Gm4535-201ENSMUST00000182274 558 ntBASIC20.46■□□□□ 0.87
Col4a1P02463 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.46■□□□□ 0.87
Col4a1P02463 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Col4a1P02463 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Gm10355-201ENSMUST00000097146 517 ntBASIC20.46■□□□□ 0.87
Col4a1P02463 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Col4a1P02463 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a1P02463 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col4a1P02463 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a1P02463 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.45■□□□□ 0.86
Col4a1P02463 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a1P02463 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Col4a1P02463 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Col4a1P02463 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms