Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tp53P02340 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Tp53P02340 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tp53P02340 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tp53P02340 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.07■□□□□ 0.48
Tp53P02340 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tp53P02340 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.07■□□□□ 0.48
Tp53P02340 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tp53P02340 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.07■□□□□ 0.48
Tp53P02340 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tp53P02340 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tp53P02340 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tp53P02340 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.06■□□□□ 0.48
Tp53P02340 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.06■□□□□ 0.48
Tp53P02340 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tp53P02340 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tp53P02340 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Tp53P02340 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tp53P02340 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tp53P02340 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tp53P02340 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.05■□□□□ 0.48
Tp53P02340 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.05■□□□□ 0.48
Tp53P02340 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.05■□□□□ 0.48
Tp53P02340 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Gm18032-201ENSMUST00000222541 538 ntBASIC18.05■□□□□ 0.48
Tp53P02340 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.05■□□□□ 0.48
Tp53P02340 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tp53P02340 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tp53P02340 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tp53P02340 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Tp53P02340 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.04■□□□□ 0.48
Tp53P02340 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.04■□□□□ 0.48
Tp53P02340 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.04■□□□□ 0.48
Tp53P02340 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Tp53P02340 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.04■□□□□ 0.48
Tp53P02340 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tp53P02340 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tp53P02340 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tp53P02340 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tp53P02340 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tp53P02340 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.04■□□□□ 0.48
Tp53P02340 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tp53P02340 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tp53P02340 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tp53P02340 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tp53P02340 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.03■□□□□ 0.48
Tp53P02340 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tp53P02340 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Tp53P02340 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tp53P02340 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms