Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
P01788 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.25□□□□□ -0.29
P01788 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
P01788 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
P01788 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.25□□□□□ -0.29
P01788 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
P01788 Gm10517-202ENSMUST00000192970 758 ntBASIC13.25□□□□□ -0.29
P01788 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.25□□□□□ -0.29
P01788 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P01788 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P01788 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01788 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P01788 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P01788 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
P01788 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.24□□□□□ -0.29
P01788 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.24□□□□□ -0.29
P01788 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.24□□□□□ -0.29
P01788 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.24□□□□□ -0.29
P01788 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
P01788 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01788 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
P01788 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.23□□□□□ -0.29
P01788 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
P01788 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
P01788 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.23□□□□□ -0.29
P01788 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P01788 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P01788 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
P01788 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P01788 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Gm24841-201ENSMUST00000158676 357 ntBASIC13.22□□□□□ -0.29
P01788 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P01788 Gm10602-201ENSMUST00000098239 609 ntBASIC13.22□□□□□ -0.29
P01788 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P01788 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.22□□□□□ -0.29
P01788 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.22□□□□□ -0.29
P01788 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms