Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syn1O88935 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Syn1O88935 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Syn1O88935 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.19■□□□□ 0.34
Syn1O88935 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Syn1O88935 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.19■□□□□ 0.34
Syn1O88935 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.19■□□□□ 0.34
Syn1O88935 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Syn1O88935 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syn1O88935 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
Syn1O88935 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Gm15920-201ENSMUST00000118998 402 ntBASIC17.18■□□□□ 0.34
Syn1O88935 Gm14140-201ENSMUST00000119999 995 ntBASIC17.18■□□□□ 0.34
Syn1O88935 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Syn1O88935 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.18■□□□□ 0.34
Syn1O88935 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.18■□□□□ 0.34
Syn1O88935 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.18■□□□□ 0.34
Syn1O88935 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.18■□□□□ 0.34
Syn1O88935 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Syn1O88935 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syn1O88935 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Syn1O88935 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Syn1O88935 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.18■□□□□ 0.34
Syn1O88935 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Syn1O88935 Gm13186-201ENSMUST00000118031 316 ntBASIC17.17■□□□□ 0.34
Syn1O88935 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.17■□□□□ 0.34
Syn1O88935 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Gm9727-201ENSMUST00000161387 555 ntBASIC17.17■□□□□ 0.34
Syn1O88935 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.17■□□□□ 0.34
Syn1O88935 Mir8112-201ENSMUST00000184382 131 ntBASIC17.17■□□□□ 0.34
Syn1O88935 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.17■□□□□ 0.34
Syn1O88935 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syn1O88935 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Syn1O88935 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.17■□□□□ 0.34
Syn1O88935 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Syn1O88935 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Gm7230-201ENSMUST00000173026 815 ntBASIC17.16■□□□□ 0.34
Syn1O88935 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.16■□□□□ 0.34
Syn1O88935 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Gm10175-201ENSMUST00000086013 645 ntBASIC17.16■□□□□ 0.34
Syn1O88935 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Syn1O88935 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syn1O88935 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.15■□□□□ 0.34
Syn1O88935 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Syn1O88935 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.15■□□□□ 0.34
Syn1O88935 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.15■□□□□ 0.34
Syn1O88935 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms