Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Gm8520-201ENSMUST00000186517 868 ntBASIC11.84□□□□□ -0.51
Sh2d1aO88890 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh2d1aO88890 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Sh2d1aO88890 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sh2d1aO88890 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sh2d1aO88890 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.83□□□□□ -0.51
Sh2d1aO88890 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sh2d1aO88890 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.51
Sh2d1aO88890 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sh2d1aO88890 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.83□□□□□ -0.52
Sh2d1aO88890 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.83□□□□□ -0.52
Sh2d1aO88890 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms