Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.32□□□□□ -0.12
Cldn1O88551 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn1O88551 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn1O88551 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.32□□□□□ -0.12
Cldn1O88551 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn1O88551 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.32□□□□□ -0.12
Cldn1O88551 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn1O88551 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn1O88551 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn1O88551 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.31□□□□□ -0.12
Cldn1O88551 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cldn1O88551 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn1O88551 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn1O88551 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn1O88551 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cldn1O88551 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn1O88551 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.31□□□□□ -0.12
Cldn1O88551 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cldn1O88551 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn1O88551 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn1O88551 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Cldn1O88551 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cldn1O88551 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.3□□□□□ -0.12
Cldn1O88551 Gm10052-201ENSMUST00000168019 960 ntBASIC14.3□□□□□ -0.12
Cldn1O88551 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.3□□□□□ -0.12
Cldn1O88551 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.3□□□□□ -0.12
Cldn1O88551 Gm7729-201ENSMUST00000050143 801 ntBASIC14.3□□□□□ -0.12
Cldn1O88551 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn1O88551 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn1O88551 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn1O88551 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn1O88551 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn1O88551 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn1O88551 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn1O88551 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn1O88551 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.29□□□□□ -0.12
Cldn1O88551 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.29□□□□□ -0.12
Cldn1O88551 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.29□□□□□ -0.12
Cldn1O88551 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn1O88551 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cldn1O88551 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn1O88551 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cldn1O88551 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldn1O88551 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldn1O88551 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.28□□□□□ -0.12
Cldn1O88551 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cldn1O88551 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms