Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.25■□□□□ 0.19
Cacna1hO88427 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.25■□□□□ 0.19
Cacna1hO88427 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cacna1hO88427 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.24■□□□□ 0.19
Cacna1hO88427 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1hO88427 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1hO88427 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cacna1hO88427 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1hO88427 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1hO88427 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.24■□□□□ 0.19
Cacna1hO88427 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.24■□□□□ 0.19
Cacna1hO88427 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1hO88427 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.24■□□□□ 0.19
Cacna1hO88427 Gm12428-201ENSMUST00000119844 727 ntBASIC16.23■□□□□ 0.19
Cacna1hO88427 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Gm13823-201ENSMUST00000119930 345 ntBASIC16.23■□□□□ 0.19
Cacna1hO88427 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.23■□□□□ 0.19
Cacna1hO88427 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.23■□□□□ 0.19
Cacna1hO88427 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1hO88427 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Cacna1hO88427 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cacna1hO88427 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Gm5682-201ENSMUST00000173402 505 ntBASIC16.22■□□□□ 0.19
Cacna1hO88427 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1hO88427 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cacna1hO88427 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1hO88427 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1hO88427 Mir1895-201ENSMUST00000122615 79 ntBASIC16.21■□□□□ 0.19
Cacna1hO88427 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1hO88427 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1hO88427 Idnk-204ENSMUST00000226010 1898 ntBASIC16.21■□□□□ 0.19
Cacna1hO88427 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cacna1hO88427 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1hO88427 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.21■□□□□ 0.19
Cacna1hO88427 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cacna1hO88427 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1hO88427 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Cacna1hO88427 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Gm17271-201ENSMUST00000165535 355 ntBASIC16.2■□□□□ 0.18
Cacna1hO88427 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms