Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Slc4a4O88343 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.73■□□□□ 0.75
Slc4a4O88343 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc4a4O88343 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slc4a4O88343 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.73■□□□□ 0.75
Slc4a4O88343 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Slc4a4O88343 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc4a4O88343 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc4a4O88343 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc4a4O88343 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Slc4a4O88343 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc4a4O88343 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slc4a4O88343 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Slc4a4O88343 Gm29707-201ENSMUST00000196325 491 ntBASIC19.72■□□□□ 0.75
Slc4a4O88343 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.72■□□□□ 0.75
Slc4a4O88343 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc4a4O88343 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc4a4O88343 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc4a4O88343 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.71■□□□□ 0.75
Slc4a4O88343 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Slc4a4O88343 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.71■□□□□ 0.75
Slc4a4O88343 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.71■□□□□ 0.75
Slc4a4O88343 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc4a4O88343 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Gm45328-201ENSMUST00000210942 917 ntBASIC19.7■□□□□ 0.74
Slc4a4O88343 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc4a4O88343 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc4a4O88343 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Slc4a4O88343 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Ank2-226ENSMUST00000189368 339 ntBASIC19.69■□□□□ 0.74
Slc4a4O88343 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc4a4O88343 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.68■□□□□ 0.74
Slc4a4O88343 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.68■□□□□ 0.74
Slc4a4O88343 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms