Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ubr1O70481 Gm13418-201ENSMUST00000119097 944 ntBASIC21.66■■□□□ 1.06
Ubr1O70481 Gm15173-201ENSMUST00000122049 433 ntBASIC21.66■■□□□ 1.06
Ubr1O70481 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.66■■□□□ 1.06
Ubr1O70481 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Ubr1O70481 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr1O70481 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Ubr1O70481 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.65■■□□□ 1.06
Ubr1O70481 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.65■■□□□ 1.06
Ubr1O70481 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
Ubr1O70481 Gm6550-201ENSMUST00000187574 993 ntBASIC21.65■■□□□ 1.06
Ubr1O70481 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.65■■□□□ 1.06
Ubr1O70481 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Ubr1O70481 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr1O70481 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Ubr1O70481 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.64■■□□□ 1.06
Ubr1O70481 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.64■■□□□ 1.06
Ubr1O70481 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.64■■□□□ 1.05
Ubr1O70481 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr1O70481 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ubr1O70481 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.63■■□□□ 1.05
Ubr1O70481 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr1O70481 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ubr1O70481 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.63■■□□□ 1.05
Ubr1O70481 Gm5364-201ENSMUST00000216789 889 ntBASIC21.63■■□□□ 1.05
Ubr1O70481 Gm5867-201ENSMUST00000063197 592 ntBASIC21.63■■□□□ 1.05
Ubr1O70481 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ubr1O70481 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Ubr1O70481 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.63■■□□□ 1.05
Ubr1O70481 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.62■■□□□ 1.05
Ubr1O70481 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ubr1O70481 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr1O70481 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ubr1O70481 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ubr1O70481 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.61■■□□□ 1.05
Ubr1O70481 Gm11780-201ENSMUST00000136880 516 ntBASIC21.61■■□□□ 1.05
Ubr1O70481 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.61■■□□□ 1.05
Ubr1O70481 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.61■■□□□ 1.05
Ubr1O70481 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.61■■□□□ 1.05
Ubr1O70481 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr1O70481 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.6■■□□□ 1.05
Ubr1O70481 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ubr1O70481 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Ubr1O70481 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.6■■□□□ 1.05
Ubr1O70481 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ubr1O70481 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.6■■□□□ 1.05
Ubr1O70481 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr1O70481 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.59■■□□□ 1.05
Ubr1O70481 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms