Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim1O70400 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim1O70400 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.5■□□□□ 0.23
Pdlim1O70400 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.5■□□□□ 0.23
Pdlim1O70400 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim1O70400 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim1O70400 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Gm37722-201ENSMUST00000193757 208 ntBASIC16.49■□□□□ 0.23
Pdlim1O70400 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Gm29707-201ENSMUST00000196325 491 ntBASIC16.49■□□□□ 0.23
Pdlim1O70400 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.49■□□□□ 0.23
Pdlim1O70400 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.49■□□□□ 0.23
Pdlim1O70400 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim1O70400 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdlim1O70400 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.48■□□□□ 0.23
Pdlim1O70400 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Gm25016-201ENSMUST00000158399 131 ntBASIC16.48■□□□□ 0.23
Pdlim1O70400 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.48■□□□□ 0.23
Pdlim1O70400 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim1O70400 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim1O70400 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim1O70400 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim1O70400 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim1O70400 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.47■□□□□ 0.23
Pdlim1O70400 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Pdlim1O70400 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pdlim1O70400 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.47■□□□□ 0.23
Pdlim1O70400 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim1O70400 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pdlim1O70400 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms