Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.84■□□□□ 0.29
Top3aO70157 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.84■□□□□ 0.29
Top3aO70157 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.84■□□□□ 0.29
Top3aO70157 Odf3b-204ENSMUST00000227834 930 ntBASIC16.84■□□□□ 0.29
Top3aO70157 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Top3aO70157 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Top3aO70157 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Top3aO70157 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top3aO70157 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Top3aO70157 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
Top3aO70157 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Top3aO70157 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.83■□□□□ 0.28
Top3aO70157 Gm3375-201ENSMUST00000203929 796 ntBASIC16.83■□□□□ 0.28
Top3aO70157 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.83■□□□□ 0.28
Top3aO70157 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.83■□□□□ 0.28
Top3aO70157 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Top3aO70157 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top3aO70157 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Top3aO70157 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Top3aO70157 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Top3aO70157 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Top3aO70157 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top3aO70157 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Top3aO70157 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Top3aO70157 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.81■□□□□ 0.28
Top3aO70157 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Top3aO70157 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Top3aO70157 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.8■□□□□ 0.28
Top3aO70157 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.8■□□□□ 0.28
Top3aO70157 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Top3aO70157 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Top3aO70157 Gm21814-202ENSMUST00000203277 873 ntBASIC16.8■□□□□ 0.28
Top3aO70157 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Top3aO70157 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.8■□□□□ 0.28
Top3aO70157 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms