Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp8O70138 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp8O70138 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp8O70138 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp8O70138 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Mmp8O70138 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Mmp8O70138 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp8O70138 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.39■□□□□ 0.85
Mmp8O70138 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp8O70138 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.39■□□□□ 0.85
Mmp8O70138 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp8O70138 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp8O70138 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Mmp8O70138 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp8O70138 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp8O70138 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Gm9013-201ENSMUST00000132939 882 ntBASIC20.38■□□□□ 0.85
Mmp8O70138 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Mmp8O70138 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.38■□□□□ 0.85
Mmp8O70138 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Gm5587-201ENSMUST00000206270 674 ntBASIC20.38■□□□□ 0.85
Mmp8O70138 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Mmp8O70138 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.38■□□□□ 0.85
Mmp8O70138 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp8O70138 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Mmp8O70138 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Mmp8O70138 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.37■□□□□ 0.85
Mmp8O70138 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Mmp8O70138 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.37■□□□□ 0.85
Mmp8O70138 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Mmp8O70138 Haglr-201ENSMUST00000100000 2085 ntBASIC20.37■□□□□ 0.85
Mmp8O70138 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Mmp8O70138 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp8O70138 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Mmp8O70138 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.36■□□□□ 0.85
Mmp8O70138 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.36■□□□□ 0.85
Mmp8O70138 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.36■□□□□ 0.85
Mmp8O70138 Gm6345-202ENSMUST00000180900 204 ntBASIC20.36■□□□□ 0.85
Mmp8O70138 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.36■□□□□ 0.85
Mmp8O70138 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.36■□□□□ 0.85
Mmp8O70138 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp8O70138 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp8O70138 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Mmp8O70138 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Mmp8O70138 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Mir770-201ENSMUST00000103252 94 ntBASIC20.35■□□□□ 0.85
Mmp8O70138 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.35■□□□□ 0.85
Mmp8O70138 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.35■□□□□ 0.85
Mmp8O70138 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.35■□□□□ 0.85
Mmp8O70138 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Mmp8O70138 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp8O70138 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.34■□□□□ 0.85
Mmp8O70138 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms