Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.38■□□□□ 0.53
Trdmt1O55055 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trdmt1O55055 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trdmt1O55055 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.37■□□□□ 0.53
Trdmt1O55055 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trdmt1O55055 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Mir5131-201ENSMUST00000175426 93 ntBASIC18.37■□□□□ 0.53
Trdmt1O55055 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.37■□□□□ 0.53
Trdmt1O55055 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdmt1O55055 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.37■□□□□ 0.53
Trdmt1O55055 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.37■□□□□ 0.53
Trdmt1O55055 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trdmt1O55055 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdmt1O55055 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.36■□□□□ 0.53
Trdmt1O55055 Gm1401-201ENSMUST00000122048 772 ntBASIC18.36■□□□□ 0.53
Trdmt1O55055 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdmt1O55055 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trdmt1O55055 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trdmt1O55055 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.36■□□□□ 0.53
Trdmt1O55055 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.36■□□□□ 0.53
Trdmt1O55055 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.36■□□□□ 0.53
Trdmt1O55055 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdmt1O55055 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdmt1O55055 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdmt1O55055 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trdmt1O55055 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Gm10060-201ENSMUST00000212002 111 ntBASIC18.35■□□□□ 0.53
Trdmt1O55055 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.35■□□□□ 0.53
Trdmt1O55055 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.35■□□□□ 0.53
Trdmt1O55055 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trdmt1O55055 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdmt1O55055 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.34■□□□□ 0.53
Trdmt1O55055 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trdmt1O55055 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.34■□□□□ 0.53
Trdmt1O55055 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.34■□□□□ 0.53
Trdmt1O55055 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trdmt1O55055 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.34■□□□□ 0.53
Trdmt1O55055 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.34■□□□□ 0.53
Trdmt1O55055 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.34■□□□□ 0.53
Trdmt1O55055 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.34■□□□□ 0.53
Trdmt1O55055 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.34■□□□□ 0.53
Trdmt1O55055 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.34■□□□□ 0.53
Trdmt1O55055 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trdmt1O55055 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trdmt1O55055 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trdmt1O55055 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Trdmt1O55055 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trdmt1O55055 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdmt1O55055 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Trdmt1O55055 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Trdmt1O55055 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.33■□□□□ 0.52
Trdmt1O55055 Gm25745-201ENSMUST00000174945 133 ntBASIC18.33■□□□□ 0.52
Trdmt1O55055 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms