Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Banf1O54962 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Banf1O54962 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.04■□□□□ 0.32
Banf1O54962 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Banf1O54962 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Banf1O54962 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Banf1O54962 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.03■□□□□ 0.32
Banf1O54962 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Banf1O54962 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.03■□□□□ 0.32
Banf1O54962 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.03■□□□□ 0.32
Banf1O54962 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.03■□□□□ 0.32
Banf1O54962 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.03■□□□□ 0.32
Banf1O54962 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Banf1O54962 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Banf1O54962 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Banf1O54962 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Banf1O54962 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Banf1O54962 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.02■□□□□ 0.32
Banf1O54962 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.02■□□□□ 0.32
Banf1O54962 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Banf1O54962 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.02■□□□□ 0.31
Banf1O54962 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.02■□□□□ 0.31
Banf1O54962 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Banf1O54962 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Banf1O54962 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Banf1O54962 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.02■□□□□ 0.31
Banf1O54962 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Banf1O54962 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Banf1O54962 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Banf1O54962 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Banf1O54962 Gm7638-201ENSMUST00000121348 967 ntBASIC17.01■□□□□ 0.31
Banf1O54962 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Banf1O54962 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.01■□□□□ 0.31
Banf1O54962 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Banf1O54962 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Banf1O54962 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17■□□□□ 0.31
Banf1O54962 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Banf1O54962 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17■□□□□ 0.31
Banf1O54962 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17■□□□□ 0.31
Banf1O54962 Gm9731-201ENSMUST00000209480 747 ntBASIC17■□□□□ 0.31
Banf1O54962 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Banf1O54962 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17■□□□□ 0.31
Banf1O54962 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17■□□□□ 0.31
Banf1O54962 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Banf1O54962 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Banf1O54962 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Banf1O54962 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Banf1O54962 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Banf1O54962 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Banf1O54962 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms