Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.39■□□□□ 0.53
SpibO35906 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.39■□□□□ 0.53
SpibO35906 Gm18195-201ENSMUST00000207604 706 ntBASIC18.39■□□□□ 0.53
SpibO35906 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SpibO35906 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SpibO35906 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SpibO35906 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SpibO35906 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Gm27525-201ENSMUST00000184465 107 ntBASIC18.38■□□□□ 0.53
SpibO35906 Gm6376-201ENSMUST00000209407 580 ntBASIC18.38■□□□□ 0.53
SpibO35906 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.38■□□□□ 0.53
SpibO35906 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.38■□□□□ 0.53
SpibO35906 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SpibO35906 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SpibO35906 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.38■□□□□ 0.53
SpibO35906 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
SpibO35906 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.37■□□□□ 0.53
SpibO35906 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SpibO35906 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.37■□□□□ 0.53
SpibO35906 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SpibO35906 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.37■□□□□ 0.53
SpibO35906 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SpibO35906 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SpibO35906 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Gm2651-201ENSMUST00000203560 838 ntBASIC18.36■□□□□ 0.53
SpibO35906 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SpibO35906 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
SpibO35906 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SpibO35906 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SpibO35906 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SpibO35906 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.35■□□□□ 0.53
SpibO35906 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.35■□□□□ 0.53
SpibO35906 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.35■□□□□ 0.53
SpibO35906 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.35■□□□□ 0.53
SpibO35906 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.35■□□□□ 0.53
SpibO35906 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.35■□□□□ 0.53
SpibO35906 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SpibO35906 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.35■□□□□ 0.53
SpibO35906 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SpibO35906 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SpibO35906 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SpibO35906 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms