Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
Capn6O35646 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn6O35646 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Capn6O35646 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Capn6O35646 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Capn6O35646 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.05■□□□□ 0.32
Capn6O35646 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Capn6O35646 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Capn6O35646 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Gm7638-201ENSMUST00000121348 967 ntBASIC17.04■□□□□ 0.32
Capn6O35646 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Capn6O35646 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Capn6O35646 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Capn6O35646 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Capn6O35646 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.03■□□□□ 0.32
Capn6O35646 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Capn6O35646 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Capn6O35646 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.03■□□□□ 0.32
Capn6O35646 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Capn6O35646 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Capn6O35646 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Capn6O35646 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Capn6O35646 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Capn6O35646 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Capn6O35646 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Capn6O35646 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Gm15039-201ENSMUST00000118914 875 ntBASIC17.02■□□□□ 0.32
Capn6O35646 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.02■□□□□ 0.32
Capn6O35646 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.02■□□□□ 0.32
Capn6O35646 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Capn6O35646 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.02■□□□□ 0.32
Capn6O35646 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Capn6O35646 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.02■□□□□ 0.31
Capn6O35646 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Capn6O35646 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Capn6O35646 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Capn6O35646 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Capn6O35646 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Capn6O35646 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Capn6O35646 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.02■□□□□ 0.31
Capn6O35646 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Capn6O35646 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.02■□□□□ 0.31
Capn6O35646 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Capn6O35646 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Capn6O35646 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.01■□□□□ 0.31
Capn6O35646 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.01■□□□□ 0.31
Capn6O35646 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.01■□□□□ 0.31
Capn6O35646 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Capn6O35646 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Capn6O35646 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms