Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clcn6O35454 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Clcn6O35454 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Gm20760-201ENSMUST00000179197 648 ntBASIC17.87■□□□□ 0.45
Clcn6O35454 Gm38170-201ENSMUST00000195404 816 ntBASIC17.87■□□□□ 0.45
Clcn6O35454 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 AC168059.2-201ENSMUST00000224473 333 ntBASIC17.87■□□□□ 0.45
Clcn6O35454 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Clcn6O35454 Gm26831-201ENSMUST00000181458 1380 ntBASIC17.87■□□□□ 0.45
Clcn6O35454 Gm44742-201ENSMUST00000207190 1412 ntBASIC17.87■□□□□ 0.45
Clcn6O35454 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.87■□□□□ 0.45
Clcn6O35454 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clcn6O35454 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn6O35454 Gm43980-201ENSMUST00000204899 1612 ntBASIC17.87■□□□□ 0.45
Clcn6O35454 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Mir466f-2-201ENSMUST00000104805 94 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 Gm22032-201ENSMUST00000116946 116 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Gm14739-201ENSMUST00000120424 802 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clcn6O35454 AC153961.1-201ENSMUST00000217760 385 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 AC153529.1-201ENSMUST00000217818 370 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 AC147628.1-201ENSMUST00000228193 688 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clcn6O35454 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 CT010447.1-201ENSMUST00000225657 1608 ntBASIC17.86■□□□□ 0.45
Clcn6O35454 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Clcn6O35454 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clcn6O35454 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn6O35454 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Clcn6O35454 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.85■□□□□ 0.45
Clcn6O35454 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clcn6O35454 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.85■□□□□ 0.45
Clcn6O35454 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Gm25116-201ENSMUST00000157191 122 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.85■□□□□ 0.45
Clcn6O35454 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC17.85■□□□□ 0.45
Clcn6O35454 Gm38285-201ENSMUST00000192928 922 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC17.85■□□□□ 0.45
Clcn6O35454 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Gm20049-201ENSMUST00000219950 730 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC17.85■□□□□ 0.45
Clcn6O35454 AC162940.1-201ENSMUST00000224745 1167 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 Zfp783-201ENSMUST00000095946 670 ntBASIC17.85■□□□□ 0.45
Clcn6O35454 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Clcn6O35454 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn6O35454 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.84■□□□□ 0.45
Clcn6O35454 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Clcn6O35454 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn6O35454 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Clcn6O35454 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn6O35454 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn6O35454 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn6O35454 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC17.84■□□□□ 0.45
Clcn6O35454 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC17.84■□□□□ 0.45
Clcn6O35454 AC155266.1-201ENSMUST00000220762 904 ntBASIC17.84■□□□□ 0.45
Clcn6O35454 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms