Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf11bO08712 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tnfrsf11bO08712 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tnfrsf11bO08712 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Gm715-201ENSMUST00000117865 831 ntBASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Odf3b-204ENSMUST00000227834 930 ntBASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf11bO08712 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf11bO08712 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Gm3375-201ENSMUST00000203929 796 ntBASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf11bO08712 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf11bO08712 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms