Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Raet1aO08602 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Raet1aO08602 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Raet1aO08602 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.82□□□□□ -0.04
Raet1aO08602 Gm11539-201ENSMUST00000119837 557 ntBASIC14.82□□□□□ -0.04
Raet1aO08602 Gm13436-201ENSMUST00000120418 567 ntBASIC14.82□□□□□ -0.04
Raet1aO08602 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.82□□□□□ -0.04
Raet1aO08602 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Raet1aO08602 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Raet1aO08602 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Raet1aO08602 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Raet1aO08602 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Raet1aO08602 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Raet1aO08602 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.81□□□□□ -0.04
Raet1aO08602 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Raet1aO08602 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.81□□□□□ -0.04
Raet1aO08602 Gm2274-201ENSMUST00000184539 609 ntBASIC14.81□□□□□ -0.04
Raet1aO08602 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Gm7370-201ENSMUST00000219471 767 ntBASIC14.81□□□□□ -0.04
Raet1aO08602 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Haglr-201ENSMUST00000100000 2085 ntBASIC14.81□□□□□ -0.04
Raet1aO08602 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Raet1aO08602 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Raet1aO08602 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.8□□□□□ -0.04
Raet1aO08602 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.8□□□□□ -0.04
Raet1aO08602 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Raet1aO08602 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Raet1aO08602 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Raet1aO08602 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Raet1aO08602 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
Raet1aO08602 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.79□□□□□ -0.04
Raet1aO08602 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.79□□□□□ -0.04
Raet1aO08602 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Raet1aO08602 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.79□□□□□ -0.04
Raet1aO08602 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Raet1aO08602 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Raet1aO08602 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms