Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
B020004C17RikJ3QP07 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Gm15467-201ENSMUST00000120582 445 ntBASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
B020004C17RikJ3QP07 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.65■□□□□ 0.58
B020004C17RikJ3QP07 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Gm12497-201ENSMUST00000138778 237 ntBASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
B020004C17RikJ3QP07 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 AV026068-213ENSMUST00000223675 1171 ntBASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
B020004C17RikJ3QP07 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Gm6089-201ENSMUST00000197666 938 ntBASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.62■□□□□ 0.57
B020004C17RikJ3QP07 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms