Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Gm13186-201ENSMUST00000118031 316 ntBASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav13d-3J3QMG8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Gm7213-201ENSMUST00000215977 950 ntBASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-3J3QMG8 Phf7-203ENSMUST00000226565 1971 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Actl10-202ENSMUST00000226583 1501 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Mir5130-201ENSMUST00000175160 84 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Gm10566-201ENSMUST00000086739 996 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-3J3QMG8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Gm45058-201ENSMUST00000205810 766 ntBASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Gm18959-201ENSMUST00000208954 655 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms