Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syce3B5KM66 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.2■□□□□ 0.66
Syce3B5KM66 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Syce3B5KM66 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Syce3B5KM66 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.2■□□□□ 0.66
Syce3B5KM66 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Gm42642-201ENSMUST00000200683 355 ntBASIC19.2■□□□□ 0.66
Syce3B5KM66 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Syce3B5KM66 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syce3B5KM66 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Syce3B5KM66 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.19■□□□□ 0.66
Syce3B5KM66 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.19■□□□□ 0.66
Syce3B5KM66 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.19■□□□□ 0.66
Syce3B5KM66 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Syce3B5KM66 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Syce3B5KM66 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Syce3B5KM66 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syce3B5KM66 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Gm7290-201ENSMUST00000104990 617 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Gm12918-201ENSMUST00000120234 636 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Gm15710-201ENSMUST00000121821 636 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Gm26524-201ENSMUST00000192339 390 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Gm5075-201ENSMUST00000196916 622 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.18■□□□□ 0.66
Syce3B5KM66 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Syce3B5KM66 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Syce3B5KM66 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.17■□□□□ 0.66
Syce3B5KM66 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syce3B5KM66 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syce3B5KM66 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syce3B5KM66 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms