Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp42B2RQC2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.55■□□□□ 0.72
Usp42B2RQC2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp42B2RQC2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp42B2RQC2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Gm29707-201ENSMUST00000196325 491 ntBASIC19.54■□□□□ 0.72
Usp42B2RQC2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.54■□□□□ 0.72
Usp42B2RQC2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp42B2RQC2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.53■□□□□ 0.72
Usp42B2RQC2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Haglr-201ENSMUST00000100000 2085 ntBASIC19.53■□□□□ 0.72
Usp42B2RQC2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Usp42B2RQC2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp42B2RQC2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Usp42B2RQC2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Usp42B2RQC2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp42B2RQC2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp42B2RQC2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp42B2RQC2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp42B2RQC2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms