Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc112A0AUP1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc112A0AUP1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc112A0AUP1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc112A0AUP1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc112A0AUP1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc112A0AUP1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc112A0AUP1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms