Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-4A0A140T8Q4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm13509-201ENSMUST00000119733 1308 ntBASIC10.46□□□□□ -0.73
Igkv3-4A0A140T8Q4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Igkv3-4A0A140T8Q4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms