Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm10252-201ENSMUST00000209541 832 ntBASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Mir6982-201ENSMUST00000184354 68 ntBASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trbv13-2A0A140T8N6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm11539-201ENSMUST00000119837 557 ntBASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm13436-201ENSMUST00000120418 567 ntBASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trbv13-2A0A140T8N6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv13-2A0A140T8N6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv13-2A0A140T8N6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv13-2A0A140T8N6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trbv13-2A0A140T8N6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trbv13-2A0A140T8N6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv13-2A0A140T8N6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms