Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc194A0A140LIT1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc194A0A140LIT1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Gm29257-201ENSMUST00000186115 639 ntBASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc194A0A140LIT1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Gm7638-201ENSMUST00000121348 967 ntBASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Gm10653-202ENSMUST00000139570 835 ntBASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc194A0A140LIT1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Gm18958-201ENSMUST00000174258 762 ntBASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Gm38027-201ENSMUST00000192315 235 ntBASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc194A0A140LIT1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Gm13168-201ENSMUST00000121771 632 ntBASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc194A0A140LIT1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms