Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mir8112-201ENSMUST00000184382 131 ntBASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm6659-201ENSMUST00000174752 547 ntBASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-4A0A0G2JG01 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-4A0A0G2JG01 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm27463-201ENSMUST00000183569 57 ntBASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm13401-201ENSMUST00000117074 291 ntBASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm12085-201ENSMUST00000119263 940 ntBASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.57□□□□□ -0.24
Trav13n-4A0A0G2JG01 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms