Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-4A0A0G2JFX3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm12896-201ENSMUST00000118430 226 ntBASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms