Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv30A0A0B4J1P1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv30A0A0B4J1P1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm9987-201ENSMUST00000069768 567 ntBASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv30A0A0B4J1P1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv30A0A0B4J1P1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trbv30A0A0B4J1P1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms