Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv3A0A0A6YYE2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Mir6349-201ENSMUST00000184059 97 ntBASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv3A0A0A6YYE2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv3A0A0A6YYE2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms