Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-5A0A075B6B9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-5A0A075B6B9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-5A0A075B6B9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-5A0A075B6B9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-5A0A075B6B9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav6d-5A0A075B6B9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-5A0A075B6B9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-5A0A075B6B9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav6d-5A0A075B6B9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm4974-201ENSMUST00000209974 875 ntBASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-5A0A075B6B9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms