Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-2-dv6-2A0A075B650 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Dio3-201ENSMUST00000097228 1449 ntBASIC13.71□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm4974-201ENSMUST00000209974 875 ntBASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms