Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav12-3A0A075B648 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12-3A0A075B648 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-3A0A075B648 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Gm11175-201ENSMUST00000116172 543 ntBASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12-3A0A075B648 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms