Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Gm13216-201ENSMUST00000117145 591 ntBASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Gm24841-201ENSMUST00000158676 357 ntBASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Gm43183-201ENSMUST00000200632 547 ntBASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-4A0A075B631 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav9n-4A0A075B631 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Gm37856-201ENSMUST00000191634 999 ntBASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9n-4A0A075B631 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9n-4A0A075B631 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms