Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-5A0A075B621 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Flg-201ENSMUST00000050758 1488 ntBASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-5A0A075B621 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Gm27454-201ENSMUST00000185090 204 ntBASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-5A0A075B621 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6n-5A0A075B621 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-5A0A075B621 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms