Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7n-4A0A075B620 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Gm13241-201ENSMUST00000094493 780 ntBASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav7n-4A0A075B620 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav7n-4A0A075B620 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7n-4A0A075B620 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7n-4A0A075B620 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms