Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16d-dv11A0A075B617 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm13234-201ENSMUST00000120010 747 ntBASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm38285-201ENSMUST00000192928 922 ntBASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm43017-201ENSMUST00000198296 752 ntBASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav16d-dv11A0A075B617 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16d-dv11A0A075B617 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16d-dv11A0A075B617 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16d-dv11A0A075B617 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16d-dv11A0A075B617 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Gm12821-201ENSMUST00000120022 600 ntBASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav16d-dv11A0A075B617 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16d-dv11A0A075B617 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms