Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav1A0A075B5Z4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Gm27011-201ENSMUST00000182352 972 ntBASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav1A0A075B5Z4 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav1A0A075B5Z4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav1A0A075B5Z4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav1A0A075B5Z4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav1A0A075B5Z4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav1A0A075B5Z4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav1A0A075B5Z4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trav1A0A075B5Z4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav1A0A075B5Z4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Actl10-202ENSMUST00000226583 1501 ntBASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav1A0A075B5Z4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms