Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Clcf1Q9QZM3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcf1Q9QZM3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcf1Q9QZM3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcf1Q9QZM3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.23■□□□□ 0.99
Clcf1Q9QZM3 Gm11599-201ENSMUST00000118720 878 ntBASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcf1Q9QZM3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcf1Q9QZM3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcf1Q9QZM3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Clcf1Q9QZM3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcf1Q9QZM3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcf1Q9QZM3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcf1Q9QZM3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clcf1Q9QZM3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcf1Q9QZM3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcf1Q9QZM3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcf1Q9QZM3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Clcf1Q9QZM3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcf1Q9QZM3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.11■□□□□ 0.97
Clcf1Q9QZM3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcf1Q9QZM3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcf1Q9QZM3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcf1Q9QZM3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Clcf1Q9QZM3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.08■□□□□ 0.97
Clcf1Q9QZM3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcf1Q9QZM3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 Particl-201ENSMUST00000205370 1560 ntBASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcf1Q9QZM3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcf1Q9QZM3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcf1Q9QZM3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.02■□□□□ 0.96
Clcf1Q9QZM3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Clcf1Q9QZM3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.94■□□□□ 0.94
Clcf1Q9QZM3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms