Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Clcf1Q9QZM3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcf1Q9QZM3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcf1Q9QZM3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcf1Q9QZM3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.23■□□□□ 0.99
Clcf1Q9QZM3 Gm11599-201ENSMUST00000118720 878 ntBASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcf1Q9QZM3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcf1Q9QZM3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcf1Q9QZM3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcf1Q9QZM3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcf1Q9QZM3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcf1Q9QZM3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcf1Q9QZM3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcf1Q9QZM3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Clcf1Q9QZM3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcf1Q9QZM3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcf1Q9QZM3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcf1Q9QZM3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clcf1Q9QZM3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcf1Q9QZM3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcf1Q9QZM3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcf1Q9QZM3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Clcf1Q9QZM3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcf1Q9QZM3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.11■□□□□ 0.97
Clcf1Q9QZM3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcf1Q9QZM3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcf1Q9QZM3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcf1Q9QZM3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Clcf1Q9QZM3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.08■□□□□ 0.97
Clcf1Q9QZM3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcf1Q9QZM3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 Particl-201ENSMUST00000205370 1560 ntBASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Clcf1Q9QZM3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcf1Q9QZM3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcf1Q9QZM3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcf1Q9QZM3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcf1Q9QZM3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcf1Q9QZM3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.02■□□□□ 0.96
Clcf1Q9QZM3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Clcf1Q9QZM3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Clcf1Q9QZM3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcf1Q9QZM3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcf1Q9QZM3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcf1Q9QZM3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Clcf1Q9QZM3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.95■□□□□ 0.94
Clcf1Q9QZM3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.94■□□□□ 0.94
Clcf1Q9QZM3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms