Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr3Q9DCF9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr3Q9DCF9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr3Q9DCF9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ssr3Q9DCF9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssr3Q9DCF9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ssr3Q9DCF9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Ssr3Q9DCF9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Ssr3Q9DCF9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr3Q9DCF9 Peli2-204ENSMUST00000226513 1320 ntBASIC20.95■□□□□ 0.94
Ssr3Q9DCF9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr3Q9DCF9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssr3Q9DCF9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Ssr3Q9DCF9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ssr3Q9DCF9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr3Q9DCF9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr3Q9DCF9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ssr3Q9DCF9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssr3Q9DCF9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr3Q9DCF9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssr3Q9DCF9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ssr3Q9DCF9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssr3Q9DCF9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ssr3Q9DCF9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ssr3Q9DCF9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ssr3Q9DCF9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ssr3Q9DCF9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ssr3Q9DCF9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssr3Q9DCF9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssr3Q9DCF9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ssr3Q9DCF9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.87■□□□□ 0.93
Ssr3Q9DCF9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.87■□□□□ 0.93
Ssr3Q9DCF9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ssr3Q9DCF9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ssr3Q9DCF9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr3Q9DCF9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssr3Q9DCF9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.86■□□□□ 0.93
Ssr3Q9DCF9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ssr3Q9DCF9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.85■□□□□ 0.93
Ssr3Q9DCF9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ssr3Q9DCF9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssr3Q9DCF9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Ssr3Q9DCF9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ssr3Q9DCF9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssr3Q9DCF9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ssr3Q9DCF9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ssr3Q9DCF9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ssr3Q9DCF9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Ssr3Q9DCF9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr3Q9DCF9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ssr3Q9DCF9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssr3Q9DCF9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Ssr3Q9DCF9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ssr3Q9DCF9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssr3Q9DCF9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ssr3Q9DCF9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Ssr3Q9DCF9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssr3Q9DCF9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ssr3Q9DCF9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssr3Q9DCF9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssr3Q9DCF9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ssr3Q9DCF9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssr3Q9DCF9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ssr3Q9DCF9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ssr3Q9DCF9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssr3Q9DCF9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssr3Q9DCF9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Ssr3Q9DCF9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.73■□□□□ 0.91
Ssr3Q9DCF9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssr3Q9DCF9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssr3Q9DCF9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssr3Q9DCF9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms