Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl55Q9CZ83 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.27■□□□□ 0.04
Mrpl55Q9CZ83 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Mrpl55Q9CZ83 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl55Q9CZ83 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Gm6658-202ENSMUST00000209493 1885 ntBASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mrpl55Q9CZ83 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Mrpl55Q9CZ83 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Mrpl55Q9CZ83 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl55Q9CZ83 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl55Q9CZ83 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl55Q9CZ83 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Mrpl55Q9CZ83 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl55Q9CZ83 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl55Q9CZ83 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl55Q9CZ83 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl55Q9CZ83 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl55Q9CZ83 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mrpl55Q9CZ83 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl55Q9CZ83 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mrpl55Q9CZ83 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl55Q9CZ83 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl55Q9CZ83 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl55Q9CZ83 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl55Q9CZ83 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl55Q9CZ83 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl55Q9CZ83 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Mrpl55Q9CZ83 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mrpl55Q9CZ83 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mrpl55Q9CZ83 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mrpl55Q9CZ83 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Mrpl55Q9CZ83 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mrpl55Q9CZ83 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.2■□□□□ 0.02
Mrpl55Q9CZ83 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mrpl55Q9CZ83 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mrpl55Q9CZ83 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mrpl55Q9CZ83 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.19■□□□□ 0.02
Mrpl55Q9CZ83 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.19■□□□□ 0.02
Mrpl55Q9CZ83 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mrpl55Q9CZ83 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.18■□□□□ 0.02
Mrpl55Q9CZ83 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mrpl55Q9CZ83 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mrpl55Q9CZ83 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mrpl55Q9CZ83 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mrpl55Q9CZ83 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mrpl55Q9CZ83 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.17■□□□□ 0.02
Mrpl55Q9CZ83 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mrpl55Q9CZ83 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mrpl55Q9CZ83 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mrpl55Q9CZ83 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mrpl55Q9CZ83 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mrpl55Q9CZ83 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mrpl55Q9CZ83 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Mrpl55Q9CZ83 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mrpl55Q9CZ83 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mrpl55Q9CZ83 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mrpl55Q9CZ83 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Mrpl55Q9CZ83 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mrpl55Q9CZ83 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mrpl55Q9CZ83 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mrpl55Q9CZ83 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.13■□□□□ 0.01
Mrpl55Q9CZ83 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Mrpl55Q9CZ83 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Mrpl55Q9CZ83 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mrpl55Q9CZ83 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mrpl55Q9CZ83 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mrpl55Q9CZ83 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Mrpl55Q9CZ83 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mrpl55Q9CZ83 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mrpl55Q9CZ83 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mrpl55Q9CZ83 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl55Q9CZ83 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl55Q9CZ83 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mrpl55Q9CZ83 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms