Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC29.61■■■□□ 2.33
Trim34aQ99PP6 Gm4799-201ENSMUST00000095396 657 ntBASIC29.61■■■□□ 2.33
Trim34aQ99PP6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29.61■■■□□ 2.33
Trim34aQ99PP6 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.6■■■□□ 2.33
Trim34aQ99PP6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Trim34aQ99PP6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.6■■■□□ 2.33
Trim34aQ99PP6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.59■■■□□ 2.33
Trim34aQ99PP6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.59■■■□□ 2.33
Trim34aQ99PP6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.59■■■□□ 2.33
Trim34aQ99PP6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Trim34aQ99PP6 Scarna2-201ENSMUST00000157560 414 ntBASIC29.58■■■□□ 2.33
Trim34aQ99PP6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Trim34aQ99PP6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.58■■■□□ 2.33
Trim34aQ99PP6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Trim34aQ99PP6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Trim34aQ99PP6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Trim34aQ99PP6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.58■■■□□ 2.33
Trim34aQ99PP6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Trim34aQ99PP6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC29.57■■■□□ 2.32
Trim34aQ99PP6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Trim34aQ99PP6 Zxda-201ENSMUST00000117281 2621 ntBASIC29.56■■■□□ 2.32
Trim34aQ99PP6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Trim34aQ99PP6 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.55■■■□□ 2.32
Trim34aQ99PP6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Trim34aQ99PP6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.55■■■□□ 2.32
Trim34aQ99PP6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Trim34aQ99PP6 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.53■■■□□ 2.32
Trim34aQ99PP6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Trim34aQ99PP6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Trim34aQ99PP6 Gm11687-201ENSMUST00000118911 886 ntBASIC29.52■■■□□ 2.32
Trim34aQ99PP6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC29.52■■■□□ 2.32
Trim34aQ99PP6 Gm9806-201ENSMUST00000051080 552 ntBASIC29.52■■■□□ 2.32
Trim34aQ99PP6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Trim34aQ99PP6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Trim34aQ99PP6 Gm37136-201ENSMUST00000194368 194 ntBASIC29.51■■■□□ 2.31
Trim34aQ99PP6 Mir3960-201ENSMUST00000198213 73 ntBASIC29.51■■■□□ 2.31
Trim34aQ99PP6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Trim34aQ99PP6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Trim34aQ99PP6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Trim34aQ99PP6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.45■■■□□ 2.31
Trim34aQ99PP6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
Trim34aQ99PP6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
Trim34aQ99PP6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Trim34aQ99PP6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
Trim34aQ99PP6 Gm16437-201ENSMUST00000025669 507 ntBASIC29.44■■■□□ 2.3
Trim34aQ99PP6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.43■■■□□ 2.3
Trim34aQ99PP6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Trim34aQ99PP6 Gm45364-201ENSMUST00000210883 159 ntBASIC29.42■■■□□ 2.3
Trim34aQ99PP6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.42■■■□□ 2.3
Trim34aQ99PP6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Trim34aQ99PP6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Trim34aQ99PP6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Trim34aQ99PP6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Trim34aQ99PP6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Trim34aQ99PP6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
Trim34aQ99PP6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Trim34aQ99PP6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29.38■■■□□ 2.29
Trim34aQ99PP6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Trim34aQ99PP6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Trim34aQ99PP6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Trim34aQ99PP6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Trim34aQ99PP6 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.36■■■□□ 2.29
Trim34aQ99PP6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Trim34aQ99PP6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Trim34aQ99PP6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Trim34aQ99PP6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Gm12366-201ENSMUST00000121722 873 ntBASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Gm5786-201ENSMUST00000085368 882 ntBASIC29.33■■■□□ 2.29
Trim34aQ99PP6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Trim34aQ99PP6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
Trim34aQ99PP6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Trim34aQ99PP6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Trim34aQ99PP6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.31■■■□□ 2.28
Trim34aQ99PP6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC29.31■■■□□ 2.28
Trim34aQ99PP6 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.31■■■□□ 2.28
Trim34aQ99PP6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Trim34aQ99PP6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29.3■■■□□ 2.28
Trim34aQ99PP6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Trim34aQ99PP6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trim34aQ99PP6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
Trim34aQ99PP6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trim34aQ99PP6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trim34aQ99PP6 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.28■■■□□ 2.28
Trim34aQ99PP6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Trim34aQ99PP6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trim34aQ99PP6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trim34aQ99PP6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.28
Trim34aQ99PP6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Trim34aQ99PP6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Trim34aQ99PP6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Trim34aQ99PP6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Trim34aQ99PP6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.25■■■□□ 2.27
Trim34aQ99PP6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Trim34aQ99PP6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Trim34aQ99PP6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Trim34aQ99PP6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms