Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.34■■□□□ 1.49
Smarcd2Q99JR8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcd2Q99JR8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smarcd2Q99JR8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smarcd2Q99JR8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Smarcd2Q99JR8 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.31■■□□□ 1.48
Smarcd2Q99JR8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smarcd2Q99JR8 Gm9806-201ENSMUST00000051080 552 ntBASIC24.31■■□□□ 1.48
Smarcd2Q99JR8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.31■■□□□ 1.48
Smarcd2Q99JR8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Gm11687-201ENSMUST00000118911 886 ntBASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcd2Q99JR8 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.29■■□□□ 1.48
Smarcd2Q99JR8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.29■■□□□ 1.48
Smarcd2Q99JR8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Smarcd2Q99JR8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smarcd2Q99JR8 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.28■■□□□ 1.48
Smarcd2Q99JR8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smarcd2Q99JR8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smarcd2Q99JR8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smarcd2Q99JR8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.26■■□□□ 1.47
Smarcd2Q99JR8 Gm37136-201ENSMUST00000194368 194 ntBASIC24.26■■□□□ 1.47
Smarcd2Q99JR8 Mir3960-201ENSMUST00000198213 73 ntBASIC24.26■■□□□ 1.47
Smarcd2Q99JR8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.26■■□□□ 1.47
Smarcd2Q99JR8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcd2Q99JR8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.24■■□□□ 1.47
Smarcd2Q99JR8 Gm16437-201ENSMUST00000025669 507 ntBASIC24.24■■□□□ 1.47
Smarcd2Q99JR8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcd2Q99JR8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.24■■□□□ 1.47
Smarcd2Q99JR8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcd2Q99JR8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.23■■□□□ 1.47
Smarcd2Q99JR8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcd2Q99JR8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.21■■□□□ 1.47
Smarcd2Q99JR8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Smarcd2Q99JR8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
Smarcd2Q99JR8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smarcd2Q99JR8 Gm45364-201ENSMUST00000210883 159 ntBASIC24.2■■□□□ 1.46
Smarcd2Q99JR8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smarcd2Q99JR8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smarcd2Q99JR8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.18■■□□□ 1.46
Smarcd2Q99JR8 Gm12366-201ENSMUST00000121722 873 ntBASIC24.18■■□□□ 1.46
Smarcd2Q99JR8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.18■■□□□ 1.46
Smarcd2Q99JR8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.18■■□□□ 1.46
Smarcd2Q99JR8 Gm5786-201ENSMUST00000085368 882 ntBASIC24.18■■□□□ 1.46
Smarcd2Q99JR8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcd2Q99JR8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Smarcd2Q99JR8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.17■■□□□ 1.46
Smarcd2Q99JR8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Smarcd2Q99JR8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smarcd2Q99JR8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smarcd2Q99JR8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcd2Q99JR8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.15■■□□□ 1.46
Smarcd2Q99JR8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcd2Q99JR8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcd2Q99JR8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcd2Q99JR8 Zxda-201ENSMUST00000117281 2621 ntBASIC24.14■■□□□ 1.45
Smarcd2Q99JR8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.14■■□□□ 1.45
Smarcd2Q99JR8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smarcd2Q99JR8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smarcd2Q99JR8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Smarcd2Q99JR8 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.14■■□□□ 1.45
Smarcd2Q99JR8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Smarcd2Q99JR8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcd2Q99JR8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcd2Q99JR8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.12■■□□□ 1.45
Smarcd2Q99JR8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Smarcd2Q99JR8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Smarcd2Q99JR8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
Smarcd2Q99JR8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Smarcd2Q99JR8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smarcd2Q99JR8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smarcd2Q99JR8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smarcd2Q99JR8 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.09■■□□□ 1.45
Smarcd2Q99JR8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.08■■□□□ 1.45
Smarcd2Q99JR8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.07■■□□□ 1.44
Smarcd2Q99JR8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smarcd2Q99JR8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smarcd2Q99JR8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Smarcd2Q99JR8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smarcd2Q99JR8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smarcd2Q99JR8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.05■■□□□ 1.44
Smarcd2Q99JR8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.05■■□□□ 1.44
Smarcd2Q99JR8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smarcd2Q99JR8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smarcd2Q99JR8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smarcd2Q99JR8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smarcd2Q99JR8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smarcd2Q99JR8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
Smarcd2Q99JR8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smarcd2Q99JR8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smarcd2Q99JR8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.01■■□□□ 1.43
Smarcd2Q99JR8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.01■■□□□ 1.43
Smarcd2Q99JR8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Smarcd2Q99JR8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
Smarcd2Q99JR8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smarcd2Q99JR8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms