Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm9806-201ENSMUST00000051080 552 ntBASIC27.62■■■□□ 2.01
Rfc4Q99J62 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Rfc4Q99J62 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.59■■■□□ 2.01
Rfc4Q99J62 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.59■■■□□ 2.01
Rfc4Q99J62 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rfc4Q99J62 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rfc4Q99J62 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rfc4Q99J62 Gm4799-201ENSMUST00000095396 657 ntBASIC27.57■■■□□ 2
Rfc4Q99J62 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rfc4Q99J62 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rfc4Q99J62 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.56■■■□□ 2
Rfc4Q99J62 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Rfc4Q99J62 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rfc4Q99J62 Gm16437-201ENSMUST00000025669 507 ntBASIC27.55■■■□□ 2
Rfc4Q99J62 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.55■■■□□ 2
Rfc4Q99J62 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.55■■■□□ 2
Rfc4Q99J62 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.54■■■□□ 2
Rfc4Q99J62 Gm12366-201ENSMUST00000121722 873 ntBASIC27.54■■■□□ 2
Rfc4Q99J62 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.54■■■□□ 2
Rfc4Q99J62 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.54■■■□□ 2
Rfc4Q99J62 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.54■■■□□ 2
Rfc4Q99J62 Gm5786-201ENSMUST00000085368 882 ntBASIC27.54■■■□□ 2
Rfc4Q99J62 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Rfc4Q99J62 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.53■■■□□ 2
Rfc4Q99J62 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.53■■■□□ 2
Rfc4Q99J62 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rfc4Q99J62 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Rfc4Q99J62 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rfc4Q99J62 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.52■■■□□ 2
Rfc4Q99J62 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rfc4Q99J62 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rfc4Q99J62 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rfc4Q99J62 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.51■■□□□ 1.99
Rfc4Q99J62 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rfc4Q99J62 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Rfc4Q99J62 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.49■■□□□ 1.99
Rfc4Q99J62 Mir3960-201ENSMUST00000198213 73 ntBASIC27.49■■□□□ 1.99
Rfc4Q99J62 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rfc4Q99J62 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.48■■□□□ 1.99
Rfc4Q99J62 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Rfc4Q99J62 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rfc4Q99J62 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Rfc4Q99J62 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.46■■□□□ 1.99
Rfc4Q99J62 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.46■■□□□ 1.99
Rfc4Q99J62 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Rfc4Q99J62 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Rfc4Q99J62 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rfc4Q99J62 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.45■■□□□ 1.98
Rfc4Q99J62 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rfc4Q99J62 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rfc4Q99J62 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Rfc4Q99J62 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rfc4Q99J62 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rfc4Q99J62 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rfc4Q99J62 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rfc4Q99J62 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.43■■□□□ 1.98
Rfc4Q99J62 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rfc4Q99J62 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Rfc4Q99J62 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Rfc4Q99J62 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Rfc4Q99J62 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rfc4Q99J62 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rfc4Q99J62 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.39■■□□□ 1.98
Rfc4Q99J62 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Rfc4Q99J62 Gm45364-201ENSMUST00000210883 159 ntBASIC27.39■■□□□ 1.98
Rfc4Q99J62 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rfc4Q99J62 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rfc4Q99J62 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Rfc4Q99J62 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Rfc4Q99J62 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Rfc4Q99J62 Gm37136-201ENSMUST00000194368 194 ntBASIC27.36■■□□□ 1.97
Rfc4Q99J62 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.35■■□□□ 1.97
Rfc4Q99J62 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Rfc4Q99J62 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rfc4Q99J62 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rfc4Q99J62 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.33■■□□□ 1.97
Rfc4Q99J62 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rfc4Q99J62 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rfc4Q99J62 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.33■■□□□ 1.97
Rfc4Q99J62 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfc4Q99J62 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Rfc4Q99J62 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
Rfc4Q99J62 Gm7332-201ENSMUST00000118351 454 ntBASIC27.32■■□□□ 1.96
Rfc4Q99J62 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfc4Q99J62 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfc4Q99J62 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfc4Q99J62 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rfc4Q99J62 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.3■■□□□ 1.96
Rfc4Q99J62 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.3■■□□□ 1.96
Rfc4Q99J62 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Rfc4Q99J62 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.29■■□□□ 1.96
Rfc4Q99J62 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rfc4Q99J62 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rfc4Q99J62 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rfc4Q99J62 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rfc4Q99J62 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.28■■□□□ 1.96
Rfc4Q99J62 Gm27502-201ENSMUST00000183495 199 ntBASIC27.28■■□□□ 1.96
Rfc4Q99J62 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rfc4Q99J62 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rfc4Q99J62 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.26■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms